org.biojava.bio.symbol
Interface SymbolPropertyTable

All Known Implementing Classes:
AAindex, SimpleSymbolPropertyTable

public interface SymbolPropertyTable

class for maintaining properties associated with a symbol

Author:
Mike Jones, George Waldon

Field Summary
static String AVG_MASS
           
static String HYDROPATHICITY
           
static String MONO_MASS
           
static String PK
           
static String PK_Cterm
           
static String PK_Nterm
           
 
Method Summary
 Alphabet getAlphabet()
           
 double getDoubleValue(Symbol s)
           
 String getName()
           
 

Field Detail

AVG_MASS

static final String AVG_MASS
See Also:
Constant Field Values

MONO_MASS

static final String MONO_MASS
See Also:
Constant Field Values

PK_Nterm

static final String PK_Nterm
See Also:
Constant Field Values

PK

static final String PK
See Also:
Constant Field Values

PK_Cterm

static final String PK_Cterm
See Also:
Constant Field Values

HYDROPATHICITY

static final String HYDROPATHICITY
See Also:
Constant Field Values
Method Detail

getName

String getName()

getAlphabet

Alphabet getAlphabet()

getDoubleValue

double getDoubleValue(Symbol s)
                      throws IllegalSymbolException
Throws:
IllegalSymbolException