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public interface Homology
Signifies that two or more features are homologous.
Blast hits or local multiple-sequence alignments can be represented as a set of features on sequences that have an alignment. The features will probably implement HomologyFeature.
Field Summary | |
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static ChangeType |
ALIGNMENT
Signals that the alignment describing the homologous sequences has changed. |
Method Summary | |
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Alignment |
getAlignment()
Retrieve the Alignment that specifies how the homologous regions are aligned. |
FeatureHolder |
getFeatures()
Retrieve the set of features that mark homologous regions. |
Field Detail |
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static final ChangeType ALIGNMENT
Changeable
.
Method Detail |
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FeatureHolder getFeatures()
Alignment getAlignment()
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