org.biojava.bio.seq.io.agave
Class AGAVEAltIdsPropHandler

java.lang.Object
  extended by org.biojava.bio.seq.io.agave.StAXContentHandlerBase
      extended by org.biojava.bio.seq.io.agave.StAXPropertyHandler
          extended by org.biojava.bio.seq.io.agave.AGAVEAltIdsPropHandler
All Implemented Interfaces:
AGAVEDbIdCallbackItf, StAXContentHandler

public class AGAVEAltIdsPropHandler
extends StAXPropertyHandler
implements AGAVEDbIdCallbackItf

Deals with alternate sequence IDs

Author:
Hanning Ni Doubletwist Inc

Field Summary
static StAXHandlerFactory AGAVE_ALT_IDS_PROP_HANDLER_FACTORY
           
 
Fields inherited from class org.biojava.bio.seq.io.agave.StAXPropertyHandler
featureListener, staxenv
 
Method Summary
 void addDbId(AGAVEDbId db_id)
           
 
Methods inherited from class org.biojava.bio.seq.io.agave.StAXPropertyHandler
addHandler, endElement, endElementHandler, getHandlerStackIterator, setHandlerCharacteristics, setProperty, startElement, startElementHandler
 
Methods inherited from class org.biojava.bio.seq.io.agave.StAXContentHandlerBase
characters, endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

AGAVE_ALT_IDS_PROP_HANDLER_FACTORY

public static final StAXHandlerFactory AGAVE_ALT_IDS_PROP_HANDLER_FACTORY
Method Detail

addDbId

public void addDbId(AGAVEDbId db_id)
Specified by:
addDbId in interface AGAVEDbIdCallbackItf