CLUSTAL FORMAT for T-COFFEE Version_4.39 [http://www.tcoffee.org], CPU=0.57 sec, SCORE=95, Nseq=10, Len=259 

1cms            --GEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRF
4pep            ----IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQF
2apr            AGVGTVPMTDYGN-DIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCG-SGQTKY
3app            AASGVATNTPTAN-DEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVY
4ape            -STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIY
1cms_1          -----------------YTGSLHWVPVTVQQYWQFTVDS---VTISGVVVACEGGCQAIL
hmgt_mouse      ------------------------------------------------------------
hmgb_chite      ------------------------------------------------------------
hmgl_wheat      ------------------------------------------------------------
hmgl_trybr      ------------------------------------------------------------
                                                                            

1cms            DPR-KSSTFQNLGKPLSIHYGTG-SMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTY
4pep            NPD-DSSTFEATSQELSITYGTG-SMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYY
2apr            DPN-QSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASG
3app            NP--SATGKELSGYTWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQD
4ape            TPSKSTTAKLLSGATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTED
1cms_1          DTG-TSKLVGPSSDILNIQQAIG-ATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPS
hmgt_mouse      ------------------------------------------------------------
hmgb_chite      ------------------------------------------------------------
hmgl_wheat      ------------------------------------------------------------
hmgl_trybr      ------------------------------------------------------------
                                                                            

1cms            AEFDGILGMAYPSLASEY---SIPVFDNMMNRHLVAQDLFSVYMDRNGQE--SMLTLGAI
4pep            APFDGILGLAYPSISASG---ATPVFDNLWDQGLVSQDLFSVYLSSNDDSG-SVVLLGGI
2apr            PN-DGLLGLGFDTITTVR--GVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGY
3app            TNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQQPG---VYDFGFI
4ape            STIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYHAPG---TYNFGFI
1cms_1          AYTSQDQGFCTSGFQSEN------HSQKWILGDVFIREYYSVFDRANNLVG----LAKAI
hmgt_mouse      ------------------------------------------------------------
hmgb_chite      -----------------------------------------------------------a
hmgl_wheat      ----------------------------------------------------------dp
hmgl_trybr      ----------------------------------------------------------kk
                                                                            

1cms            DPSY--------------------------------------------------------
4pep            DSSY--------------------------------------------------------
2apr            DSTK--------------------------------------------------------
3app            DSSK--------------------------------------------------------
4ape            DTTA--------------------------------------------------------
1cms_1          ------------------------------------------------------------
hmgt_mouse      ---kpkrprsayniyvsesfq---eakddsa-qgkl-klvneawknlspeekqayiqlak
hmgb_chite      --dkpkrplsaymlwlnsaresikrenpdfk-vtevakkggelwrglk--dkseweakaa
hmgl_wheat      --nkpkrapsaffvfmgefreefkqknpknksvaavgkaagerwkslsesekapyvakan
hmgl_trybr      dsnapkramtsfmffssdfr----skhsdls-ivemskaagaawkelgpeerkvyeemae
                                                                            

1cms            -------------------
4pep            -------------------
2apr            -------------------
3app            -------------------
4ape            -------------------
1cms_1          -------------------
hmgt_mouse      ddrirydnemksweeqmae
hmgb_chite      takqnyiralqeyern-gg
hmgl_wheat      klkgeynkaiaaynkgesa
hmgl_trybr      kdkerykrem---------
                                   



