class Bio::DDBJ::REST::DDBJ
Description¶ ↑
DDBJ (DNA DataBank of Japan) entry retrieval functions.
Examples¶ ↑
see xml.nig.ac.jp/wabi/Method?serviceName=DDBJ&mode=methodList&lang=en
Public Instance Methods
countBasePair(accession)
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Number and ratio of each base such as A,T,G,C.
see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=DDBJ&methodName=countBasePair&mode=methodDetail
Arguments:
-
(required) accession: (String) accession
- Returns
-
(String) tab-deliminated text
# File lib/bio/io/ddbjrest.rb, line 167 def countBasePair(accession); end
get(accessionList, paramList)
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see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=DDBJ&methodName=get&mode=methodDetail
# File lib/bio/io/ddbjrest.rb, line 171 def get(accessionList, paramList); end
getAllFeatures(accession)
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see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=DDBJ&methodName=getAllFeatures&mode=methodDetail
# File lib/bio/io/ddbjrest.rb, line 175 def getAllFeatures(accession); end
getFFEntry(accession)
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see xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=DDBJ&methodName=getFFEntry&mode=methodDetail
# File lib/bio/io/ddbjrest.rb, line 179 def getFFEntry(accession); end
getRelatedFeatures(accession, start, stop)
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xml.nig.ac.jp/wabi/Method?&lang=en&serviceName=DDBJ&methodName=getRelatedFeatures&mode=methodDetail
# File lib/bio/io/ddbjrest.rb, line 183 def getRelatedFeatures(accession, start, stop); end
getRelatedFeaturesSeq(accession, start, stop)
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# File lib/bio/io/ddbjrest.rb, line 187 def getRelatedFeaturesSeq(accession, start, stop); end