sc::SymmMolecularCoor Member List

This is the complete list of members for sc::SymmMolecularCoor, including all inherited members.

all_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
all_to_cartesian(const Ref< Molecule > &, RefSCVector &internal) | sc::IntMolecularCoor | virtual
all_to_internal(const Ref< Molecule > &, RefSCVector &internal) | sc::IntMolecularCoor | virtual
bends_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
bonds_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
cartesian_tolerance_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
change_coordinates() | sc::SymmMolecularCoor | virtual
change_coordinates_ (defined in sc::SymmMolecularCoor) | sc::SymmMolecularCoor | protected
class_desc() const | sc::DescribedClass |
class_name() const | sc::DescribedClass |
class_version() const | sc::DescribedClass |
constant_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
coordinate_tolerance_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
debug_ (defined in sc::MolecularCoor) | sc::MolecularCoor | protected
decouple_bends_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
decouple_bonds_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
dereference() | sc::RefCount | inline
DescribedClass() (defined in sc::DescribedClass) | sc::DescribedClass |
DescribedClass(const DescribedClass &) (defined in sc::DescribedClass) | sc::DescribedClass |
dim() | sc::IntMolecularCoor | virtual
dim_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
dim_natom3() | sc::MolecularCoor | inline
dir_restore_state(StateIn &si, const char *objectname, const char *keyword=0) (defined in sc::SavableState) | sc::SavableState | static
dnatom3_ (defined in sc::MolecularCoor) | sc::MolecularCoor | protected
dvc_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
extra_bonds_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
extras_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
fixed_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
followed_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
form_coordinates(int keep_variable=0) | sc::SymmMolecularCoor | virtual
form_K_matrix(RefSCDimension &dredundant, RefSCDimension &dfixed, RefSCMatrix &K, int *&is_totally_symmetric) (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
form_print_constant_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
form_print_molecule_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
form_print_simples_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
form_print_variable_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
generator_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
given_fixed_values_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
guess_hessian(RefSymmSCMatrix &hessian) | sc::SymmMolecularCoor | virtual
identifier() | sc::Identity | inline
init() | sc::SymmMolecularCoor | protectedvirtual
IntMolecularCoor(StateIn &) (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor |
IntMolecularCoor(Ref< Molecule > &mol) (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor |
IntMolecularCoor(const Ref< KeyVal > &) | sc::IntMolecularCoor |
inverse_hessian(RefSymmSCMatrix &) | sc::SymmMolecularCoor | virtual
key_restore_state(StateIn &si, const char *keyword) | sc::SavableState | static
lock_ptr() const | sc::RefCount |
managed() const (defined in sc::RefCount) | sc::RefCount | inline
managed() const | sc::RefCount | inline
matrixkit() const (defined in sc::MolecularCoor) | sc::MolecularCoor | inline
matrixkit_ (defined in sc::MolecularCoor) | sc::MolecularCoor | protected
max_kappa2_ (defined in sc::SymmMolecularCoor) | sc::SymmMolecularCoor | protected
max_update_disp_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
max_update_steps_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
MolecularCoor(Ref< Molecule > &) (defined in sc::MolecularCoor) | sc::MolecularCoor |
MolecularCoor(StateIn &) (defined in sc::MolecularCoor) | sc::MolecularCoor |
MolecularCoor(const Ref< KeyVal > &) | sc::MolecularCoor |
molecule() const | sc::MolecularCoor | inline
molecule_ (defined in sc::MolecularCoor) | sc::MolecularCoor | protected
nconstrained() | sc::IntMolecularCoor | virtual
new_coords() | sc::IntMolecularCoor | protectedvirtual
nextra_bonds_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
nreference() const | sc::RefCount | inline
only_totally_symmetric_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
operator=(const SavableState &) (defined in sc::SavableState) | sc::SavableState |
operator=(const DescribedClass &) (defined in sc::DescribedClass) | sc::DescribedClass |
operator=(const RefCount &) (defined in sc::RefCount) | sc::RefCount | inlineprotected
outs_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
print(std::ostream &=ExEnv::out0()) const | sc::SymmMolecularCoor | virtual
print_constant(std::ostream &=ExEnv::out0()) const (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | virtual
print_simples(std::ostream &=ExEnv::out0()) const (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | virtual
print_variable(std::ostream &=ExEnv::out0()) const (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | virtual
read_keyval(const Ref< KeyVal > &) | sc::IntMolecularCoor | protectedvirtual
RefCount() (defined in sc::RefCount) | sc::RefCount | inlineprotected
RefCount(const RefCount &) (defined in sc::RefCount) | sc::RefCount | inlineprotected
reference() | sc::RefCount | inline
restore_state(StateIn &si) | sc::SavableState | static
SavableState() (defined in sc::SavableState) | sc::SavableState | protected
SavableState(const SavableState &) (defined in sc::SavableState) | sc::SavableState | protected
SavableState(StateIn &) | sc::SavableState | protected
save_data_state(StateOut &) | sc::SymmMolecularCoor | virtual
save_object_state(StateOut &) | sc::SavableState |
save_state(StateOut &) | sc::SavableState |
save_state(SavableState *s, StateOut &) (defined in sc::SavableState) | sc::SavableState | static
save_vbase_state(StateOut &) | sc::SavableState | virtual
scale_bends_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
scale_bonds_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
scale_outs_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
scale_tors_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
simple_tolerance_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
symmetry_tolerance_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
SymmMolecularCoor(Ref< Molecule > &mol) (defined in sc::SymmMolecularCoor) | sc::SymmMolecularCoor |
SymmMolecularCoor(StateIn &) (defined in sc::SymmMolecularCoor) | sc::SymmMolecularCoor |
SymmMolecularCoor(const Ref< KeyVal > &) | sc::SymmMolecularCoor |
to_cartesian(const Ref< Molecule > &, const RefSCVector &internal) (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | virtual
to_cartesian(RefSCVector &cartesian, RefSCVector &internal) | sc::IntMolecularCoor | virtual
to_cartesian(RefSymmSCMatrix &cart, RefSymmSCMatrix &internal) | sc::IntMolecularCoor | virtual
sc::MolecularCoor::to_cartesian(const RefSCVector &internal) | sc::MolecularCoor |
to_internal(RefSCVector &internal) | sc::IntMolecularCoor | virtual
to_internal(RefSCVector &internal, RefSCVector &cartesian) | sc::IntMolecularCoor | virtual
to_internal(RefSymmSCMatrix &internal, RefSymmSCMatrix &cart) | sc::IntMolecularCoor | virtual
tors_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
transform_hessian_ (defined in sc::SymmMolecularCoor) | sc::SymmMolecularCoor | protected
unlock_ptr() const | sc::RefCount |
unmanage() | sc::RefCount | inline
update_bmat_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
use_locks(bool inVal) | sc::RefCount |
variable_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
watched_ (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | protected
~DescribedClass() (defined in sc::DescribedClass) | sc::DescribedClass | virtual
~Identity() (defined in sc::Identity) | sc::Identity | virtual
~IntMolecularCoor() (defined in sc::IntMolecularCoor) | sc::IntMolecularCoor | virtual
~MolecularCoor() (defined in sc::MolecularCoor) | sc::MolecularCoor | virtual
~RefCount() (defined in sc::RefCount) | sc::RefCount | virtual
~SavableState() (defined in sc::SavableState) | sc::SavableState | virtual
~SymmMolecularCoor() (defined in sc::SymmMolecularCoor) | sc::SymmMolecularCoor | virtual