Uses of Class
org.biojava.bio.seq.db.AbstractSequenceDB

Packages that use AbstractSequenceDB
org.biojava.bio.seq.db Collections of biological sequence data. 
org.biojava.bio.seq.distributed Sequences and SequenceDBs which are composed from data taken from a number of data sources. 
 

Uses of AbstractSequenceDB in org.biojava.bio.seq.db
 

Subclasses of AbstractSequenceDB in org.biojava.bio.seq.db
 class AnnotatedSequenceDB
          SequenceDB implementation which lazily applies a SequenceAnnotator to sequences retrieved from a SequenceDB.
 class CachingSequenceDB
          SequenceDB implementation that caches the results of another SequenceDB.
 class DummySequenceDB
          DummySequenceDB is an implementation which contains only a DummySequence.
 class HashSequenceDB
          An implementation of SequenceDB that uses an underlying HashMap to store the sequence objects.
 class IndexedSequenceDB
           This class implements SequenceDB on top of a set of sequence files and sequence offsets within these files.
 class SequenceDBWrapper
          An abstract implementation of SequenceDB that wraps up another database.
 class SubSequenceDB
           
 class ViewingSequenceDB
          SequenceDB implementation that returns new SequenceView instances wrapping the sequences in an underlying database.
 

Uses of AbstractSequenceDB in org.biojava.bio.seq.distributed
 

Subclasses of AbstractSequenceDB in org.biojava.bio.seq.distributed
 class DistributedSequenceDB
          Sequence database from the meta-DAS system.