Uses of Class
org.biojava.bio.dp.twohead.Cell

Packages that use Cell
org.biojava.bio.dp.twohead   
 

Uses of Cell in org.biojava.bio.dp.twohead
 

Methods in org.biojava.bio.dp.twohead that return Cell
 Cell[][] PairDPCursor.press()
          press out a new correctly sized cell array
 Cell[][] LightPairDPCursor.press()
          Returns the minimal context of the DP matrix necessary to compute the value of a single point in that matrix.
 Cell[][] AbstractMatrixPairDPCursor.press()
           
 

Methods in org.biojava.bio.dp.twohead with parameters of type Cell
 void CellCalculator.calcCell(Cell[][] cells)
           Calculate the 'scores' array in the cell at cells[0][0].
 void CellCalculator.initialize(Cell[][] cells)
          Initialize the cell at [0][0] to the recursion initial parameters.
 void PairDPCursor.next(Cell[][] cells)
          retrieve the next block of cells
 void MatrixPairDPCursor.next(Cell[][] cells)
           
 void LightPairDPCursor.next(Cell[][] cells)
          Description of the Method
 void BackMatrixPairDPCursor.next(Cell[][] cells)