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Packages that use org.biojava.bio.program.gff | |
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org.biojava.bio.program.gff | GFF manipulation. |
org.biojava.bio.program.gff3 | Support for reading and writing GFF3. |
org.biojava.bio.seq.distributed | Sequences and SequenceDBs which are composed from data taken from a number of data sources. |
Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff | |
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GFFDocumentHandler
The interface for things that listen to GFF event streams. |
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GFFEntrySet
A set of entries and comments as a representation of a GFF file. |
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GFFErrorHandler
Interface which captures any errors which occur when parsing a GFF stream. |
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GFFRecord
A single GFF record. |
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GFFRecordFilter
A filter that will accept or reject a GFFEntry. |
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IgnoreRecordException
Ignore this record in the stream. |
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SimpleGFFRecord
A no-frills implementation of a GFFRecord. |
Classes in org.biojava.bio.program.gff used by org.biojava.bio.program.gff3 | |
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GFFErrorHandler
Interface which captures any errors which occur when parsing a GFF stream. |
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IgnoreRecordException
Ignore this record in the stream. |
Classes in org.biojava.bio.program.gff used by org.biojava.bio.seq.distributed | |
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GFFEntrySet
A set of entries and comments as a representation of a GFF file. |
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