Package seq

Class Summary
FetchSeq Fetch sequences by accession from the NCBI efetch server and dump them as genbank.
GCContent Counts the GC content of a sequence in fasta format
MotifFinder2 Modified version of MotifFinder.java This program will search a fasta file for a motif.
ReverseComplement Demo of reverse complementing a fasta DNA file
SimpleAssemblyTest  
TestEmbl Demo reading an EMBL file
TestEmbl2 Another EMBL demo
TestGenbank Demo GenBank reading
TestRefSeqPrt Demo of reading RefSeqProtein
TestSubSequence Demo the use of SubSequence
TestSwissprot SwissProt format has been replaced by Uniprot format.
TestTranslation  
UniProtDemo