class Bio::TMHMM
TMHMM class for www.cbs.dtu.dk/services/TMHMM/¶ ↑
Public Class Methods
reports(data) { |report| ... }
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Splits multiple reports into a report entry.
# File lib/bio/appl/tmhmm/report.rb, line 25 def TMHMM.reports(data) entry = [] ent_state = '' data.each_line do |line| if /^\#/ =~ line if ent_state == 'next' ent_state = 'entry' elsif ent_state == 'tmh' ent_state = 'next' end else ent_state = 'tmh' end if ent_state != 'next' entry << line else if block_given? yield Bio::TMHMM::Report.new(entry) else Bio::TMHMM::Report.new(entry) end entry = [line] end end if block_given? yield Bio::TMHMM::Report.new(entry) else Bio::TMHMM::Report.new(entry) end end