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LEGAL NOTICE INFORMATION


All the files in this distribution are covered under either the Ruby's license (see the file COPYING) or public-domain except some files mentioned below.

setup.rb:

Copyright (c) 2000-2006 Minero Aoki

This program is free software.
You can distribute/modify this program under the terms of
the GNU LGPL, Lesser General Public License version 2.1.

sample/any2fasta.rb:

 Copyright (C) 2006 Pjotr Prins <p@bioruby.org>

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

sample/biofetch.rb:

 Copyright (C) 2002-2004 KATAYAMA Toshiaki <k@bioruby.org>

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

sample/enzymes.rb:

 Copyright (C) 2006 Pjotr Prins <p@bioruby.org> and
 Trevor Wennblom <trevor@corevx.com>

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

sample/fasta2tab.rb: sample/fsplit.rb: sample/gb2tab.rb: sample/genes2nuc.rb: sample/genes2pep.rb: sample/genes2tab.rb: sample/genome2tab.rb: sample/gt2fasta.rb: sample/ssearch2tab.rb: sample/tfastx2tab.rb: sample/vs-genes.rb:

 Copyright (C) 2001 KATAYAMA Toshiaki <k@bioruby.org>

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

sample/fastagrep.rb: sample/fastasort.rb: sample/na2aa.rb:

 Copyright (C) 2008 KATAYAMA Toshiaki <k@bioruby.org> & Pjotr Prins

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

sample/gb2fasta.rb:

 Copyright (C) 2001 KATAYAMA Toshiaki <k@bioruby.org>
 Copyright (C) 2002 Yoshinori K. Okuji <o@bioruby.org>

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

sample/gbtab2mysql.rb: sample/genome2rb.rb: sample/pmfetch.rb: sample/pmsearch.rb:

 Copyright (C) 2002 KATAYAMA Toshiaki <k@bioruby.org>

This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.

sample/tdiary.rb:

 Copyright (C) 2003 KATAYAMA Toshiaki <k@bioruby.org>
                    Mitsuteru C. Nakao <n@bioruby.org>
                    Itoshi NIKAIDO  <itoshi@gsc.riken.go.jp>
                    Takeya KASUKAWA <kasukawa@gsc.riken.go.jp>

This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 2 of the License, or (at your option) any later version.

test/data/uniprot/p53_human.uniprot:

This Swiss-Prot entry is copyright. It is produced through a collaboration
between  the Swiss Institute of Bioinformatics  and the  EMBL outstation -
the European Bioinformatics Institute.  There are no  restrictions on  its
use as long as its content is in no way modified and this statement is not
removed.

GPL:

Copyright (C) 1989, 1991 Free Software Foundation, Inc.
                      59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
Everyone is permitted to copy and distribute verbatim copies
of this license document, but changing it is not allowed.

LGPL:

Copyright (C) 1991, 1999 Free Software Foundation, Inc.
    59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
Everyone is permitted to copy and distribute verbatim copies
of this license document, but changing it is not allowed.

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