This class handles the essential storage of name, type and units of a map. It includes Bio::Map::ActsLikeMap, and therefore supports the methods of that module.
my_map1 = Bio::Map::SimpleMap.new('RH_map_ABC (2006)', 'RH', 'cR') my_map1.add_marker(Bio::Map::Marker.new('marker_a', '17') my_map1.add_marker(Bio::Map::Marker.new('marker_b', '5')
Builds a new Bio::Map::SimpleMap object
Arguments:
name: name of the map
type: type of the map (e.g. linkage, radiation_hybrid, cytogenetic, ...)
units: unit of the map (e.g. cM, cR, ...)
Returns |
new Bio::Map::SimpleMap object |
# File lib/bio/map.rb, line 353 def initialize (name = nil, type = nil, length = nil, units = nil) @name, @type, @length, @units = name, type, length, units @mappings_as_map = Array.new end
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