org.biojava.bio.program.abi
Class ABIFChromatogram.Parser

java.lang.Object
  extended by org.biojava.bio.program.abi.ABIFParser
      extended by org.biojava.bio.program.abi.ABIFChromatogram.Parser
Enclosing class:
ABIFChromatogram

protected class ABIFChromatogram.Parser
extends ABIFParser

An extension of ABIFParser that reads the particular fields from the ABIF that contain the chromatogram data and initializes the fields in its enclosing ABIFChromatogram instance.


Nested Class Summary
 
Nested classes/interfaces inherited from class org.biojava.bio.program.abi.ABIFParser
ABIFParser.DataAccess, ABIFParser.TaggedDataRecord
 
Constructor Summary
ABIFChromatogram.Parser(File f)
           
ABIFChromatogram.Parser(InputStream in)
           
 
Method Summary
 
Methods inherited from class org.biojava.bio.program.abi.ABIFParser
decodeDNAToken, getAllDataRecords, getDataAccess, getDataRecord
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

ABIFChromatogram.Parser

public ABIFChromatogram.Parser(InputStream in)
                        throws IOException,
                               UnsupportedChromatogramFormatException
Throws:
IOException
UnsupportedChromatogramFormatException

ABIFChromatogram.Parser

public ABIFChromatogram.Parser(File f)
                        throws IOException,
                               UnsupportedChromatogramFormatException
Throws:
IOException
UnsupportedChromatogramFormatException