Uses of Interface
org.biojava.bio.seq.db.IDMaker

Packages that use IDMaker
org.biojava.bio.seq.db Collections of biological sequence data. 
org.biojavax.bio.db Interactions between biojavax objects and a DB. 
 

Uses of IDMaker in org.biojava.bio.seq.db
 

Classes in org.biojava.bio.seq.db that implement IDMaker
static class IDMaker.ByName
           
static class IDMaker.ByURN
           
 

Fields in org.biojava.bio.seq.db declared as IDMaker
static IDMaker IDMaker.byName
          A simple implementation of IDMaker that hashes by sequence name.
static IDMaker IDMaker.byURN
          A simple implementation of IDMaker that hashes by URN.
 

Methods in org.biojava.bio.seq.db that return IDMaker
 IDMaker HashSequenceDB.getIDMaker()
          Retrieve the IDMaker associated with this database.
 

Constructors in org.biojava.bio.seq.db with parameters of type IDMaker
HashSequenceDB(IDMaker idMaker)
          Generate a HashSequenceDB object that will use idMaker to generate ids for sequences and have a null name.
HashSequenceDB(IDMaker idMaker, String name)
          Generate a HashSequenceDB object that will use idMaker to generate ids for sequences and have the requested name.
IndexedSequenceDB(IDMaker idMaker, IndexStore indexStore)
          Create an IndexedSequenceDB by specifying both the IDMaker and IndexStore used.
 

Uses of IDMaker in org.biojavax.bio.db
 

Methods in org.biojavax.bio.db that return IDMaker
 IDMaker HashRichSequenceDB.getIDMaker()
          Retrieve the IDMaker associated with this database.
 

Constructors in org.biojavax.bio.db with parameters of type IDMaker
HashRichSequenceDB(IDMaker idMaker)
          Generate a HashRichSequenceDB object that will use idMaker to generate ids for sequences and have a null name.
HashRichSequenceDB(IDMaker idMaker, String name)
          Generate a HashRichSequenceDB object that will use idMaker to generate ids for sequences and have the requested name.