Uses of Interface
org.biojava.bio.seq.io.agave.AGAVEAnnotFilter

Packages that use AGAVEAnnotFilter
org.biojava.bio.seq.io.agave Classes for converting between AGAVE XML and BioJava objects. 
 

Uses of AGAVEAnnotFilter in org.biojava.bio.seq.io.agave
 

Classes in org.biojava.bio.seq.io.agave that implement AGAVEAnnotFilter
 class Agave2AgaveAnnotFilter
          Dumping the data from biojava with source of agave into agave format
 class Embl2AgaveAnnotFilter
          Map EMBL data into AGAVE format
 class SimpleAnnotFilter
          Basic implementation of AGAVEAnnotFilter
 

Fields in org.biojava.bio.seq.io.agave declared as AGAVEAnnotFilter
protected  AGAVEAnnotFilter AgaveWriter.mAnnotFilter
          The AnnotationMap to use for getting AGAVE XML attributes from a Sequence Annotation.
 

Methods in org.biojava.bio.seq.io.agave that return AGAVEAnnotFilter
 AGAVEAnnotFilter AGAVEAnnotFilterFactory.getInstance()
           
 

Constructors in org.biojava.bio.seq.io.agave with parameters of type AGAVEAnnotFilter
AgaveWriter(AGAVEAnnotFilter filter)
          Construct with data source specific annotation to attribute mapping.